2014 Annual Science Report
Arizona State University Reporting | SEP 2013 – DEC 2014
Executive Summary
The “Follow the Elements” NAI Team at ASU carries out research, education and outreach activities centered on the chemical elements of life. Our activities are motivated by a simple observation: that life-as-we-know-it uses a non-random selection of the chemical elements. This observation prompts many questions:
- What are the rules that govern the selection of these “bioessential” elements?
- How might these elements differ in extreme environments on Earth or beyond?
- How common are the bioessential elements in the extraterrestrial environments that might harbor life?
- How are the distributions of these elements in the cosmos shaped by astrophysical processes?
The answers to these questions will shape the future exploration for life on other worlds. We sought to address these questions through laboratory, field and computational research, and use them as the basis for much of our education and outreach. To this end, our project is organized around ... Continue reading.
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Ariel Anbar
NAI, ASTEP, ASTID, Exobiology -
TEAM Active Dates:
2/2009 - 1/2015 CAN 5 -
Team Website:
http://astrobiology.asu.edu -
Members:
51 (See All) - Visit Team Page
Project Reports
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Habitability of Water-Rich Environments – Task 4 – Evaluate the Habitability of Ancient Aqueous Solutions on Mars
Goals are to constrain conditions of Mars habitability and preservation potential through in situ studies with MER rover data, the MSL Curiosity rover operating at Gale Crater, and terrestrial analog studies.
ROADMAP OBJECTIVES: 2.1 -
Stoichiometry of Life – Task 2b – Field Studies in Cuatro Cienegas
We performed two studies to evaluate ecological impacts of nitrogen and/or phosphorus fertilization in a P-deficient and hyperdiverse shallow pond in the valley of Cuatro Cienegas, Mexico.
ROADMAP OBJECTIVES: 5.1 5.2 5.3 6.1 6.2 -
Task: 3a: Ancient Records – Geologic
Among the fundamental questions in Earth history is when and where O2 first accumulated in the shallow ocean. These settings could have been ideal local ‘oases’ for initial O2 accumulation and for early eukaryotic life. Iodine geochemistry has emerged as an exciting possibility for exploring such settings characterized by carbonate deposition, but the proxy remains only rudimentarily known because of the lack of validation and calibration in modern shallow carbonate environments. Our work over the past year sought to remedy that situation while simultaneously exploring the proxy’s potential in deep time.
ROADMAP OBJECTIVES: 4.1 4.2 -
Task 4: Biogeochemical Impacts on Planetary Atmospheres
Oxygenation of Earth’s early atmosphere must have involved an efficient mode of carbon burial. In the modern ocean, carbon export of primary production is dominated by fecal pellets and aggregates produced by the animal grazer community. But during most of Earth’s history the oceans were dominated by unicellular, bacteria-like organisms (prokaryotes) causing a substantially altered biogeochemistry. In this task we experiment with the marine cyanobacterium Synechococcus sp. as a model organism and test its aggregation and sinking speed as a function of nutrient (nitrogen, phosphorus, iron) limitation. We have found that these minute cyanobacteria form aggregates in conditions that mimic the open ocean and can sink gravitationally in the water column. Experiments with added clay minerals (bentonite and kaolinite) that might have been present in the Proterozoic ocean, show that these can accelerate aggregate sinking. In addition we find that Synechococcus could potentially export carbon 2–3 times of that contained in their cells via aggregation, likely due to the scavenging of transparent exopolymer particles and dissolved organic matter. Thus, aggregation and sinking by these small cyanobacteria could have constituted an important mode of carbon export in the Proterozoic ocean.
ROADMAP OBJECTIVES: 4.1 4.2 5.2 6.1 7.2 -
Astrophysical Controls on the Elements of Life – Task 4 – Model the Injection of Supernova Material Into Protoplanetary Disks
The goal of this project has been to determine whether supernova material could be injected into a protoplanetary disk, the disk of gas and dust from which planets form. A secondary issue is whether these materials would be mixed within the disk efficiently, and whether such an injection into our own protoplanetary disk can explain the isotopic evidence from meteorites that the solar system contained short-lived radionuclides like 26Al.
ROADMAP OBJECTIVES: 1.1 3.1 -
Astrophysical Controls on the Elements of Life – Task 5 – Model the Variability of Elemental Ratios Within Clusters
We carried out studies of self-enrichment of the earliest star clusters. Building on the turbulence simulations in Pan & Scannapieco (2010) and Pan et al. (2011), we examined the mixing of heavy elements generated by stars into the surrounding cluster environments.
ROADMAP OBJECTIVES: 1.1 3.1 -
Task 3: Evaluate the Habitability of Europa’s Subsurface Ocean
We developed models for oceanic composition on Europa and provided arguments for a sulfate-rich oceanic water chemistry.
ROADMAP OBJECTIVES: None Selected -
Astrophysical Controls – Task 6 – Determine Which Elemental or Isotopic Ratios Correlate With Key Elements
Abundances of both common and trace elements can have substantial effects on the habitability of stellar systems. We study the formation and composition of structures in supernova explosions that deliver isotopes that influence habitability to material that will form new stars and planets. We examine ratios of elements that have substantial effects of the mineralogy and interiors of planets. The relative abundances of common elements vary substantially among nearby stars, and we find that the impact of this on a star’s evolution can change the amount of time its planets are habitable by large factors.
ROADMAP OBJECTIVES: 1.1 3.1 -
Astrophysical Controls on the Elements of Life, Task 1: High-Precision Isotopic Studies of Meteorites
ROADMAP OBJECTIVES: 1.1 3.1 -
Astrophysical Controls – Task 7 – Update Catalog of Elemental Ratios in Nearby Stars
Abundances of both common and trace elements can have substantial effects on the habitability of stellar systems. Elemental ratios can change the stellar evolution and mineralogy, geophysics, and surface processed of planets. We study the abundances of large samples of nearby stars and individual systems and the extent of their variation. We examine ratios of elements that have substantial effects of the mineralogy and interiors of planets. The relative abundances of common elements vary substantially among nearby stars. Extremely non-solar abundance ratios at the level that can produce substantial changes in planetary and stellar properties are present in interesting numbers.
ROADMAP OBJECTIVES: 1.1 7.2 -
Habitability of Water-Rich Environments – Task 1 – Improve and Test Codes to Model Water-Rock Interactions
Numerical codes have been developed to model chemical alteration of rocks by migrating fluids. One code is for alteration of permeable rocks by percolating fluids. Another code is for alteration of low-permeability rocks disrupted through hydro-fracturing by forming overpressured fluids. The codes could be used to model chemical weathering on Mars and Earth, and metasomatism on asteroids, moons, and planets.
ROADMAP OBJECTIVES: 2.1 2.2 -
Habitability of Water-Rich Environments – Task 5 – Evaluate the Habitability of Small Icy Satellites and Minor Planets
We constrained conditions of formation of silica phases in putative aqueous systems within the Saturn’s icy moon Enceladus, and evaluated the composition of aqueous fluids formed during thermal evolution and rock dehydration of the dwarf planet Ceres.
ROADMAP OBJECTIVES: 2.2 -
Stoichiometry of Life, Task 2a: Field Studies – Yellowstone National Park
Yellowstone National Park harbors an array of hydrothermal ecosystems with widely varying geochemical characteristics and microbial communities. Our research aimed to understand how the geochemistry of these hot springs shapes their constituent microbial communities including their composition and function. To accomplish this aim, we measured (1) physical and geochemical properties of hot spring fluids and sediments, (2) the rates of biogeochemical processes (i.e., methane oxidation, nitrogen fixation, microbial Fe cycling, photosynthesis, de-nitrification, etc.), and (3) markers for microbial community diversity (i.e., SSU rRNA, metabolic genes, lipids, proteins).
ROADMAP OBJECTIVES: 5.1 5.2 5.3 6.1 6.2 7.2 -
Astrophysical Controls – Task 2 – Model the Chemical & Dynamical Evolution of Massive Stars
Stars create the chemical elements heavier than hydrogen and helium, with the majority arising from the lives and violent deaths of massive stars in supernova explosions. The starting chemical composition of stars also affects their evolution and that of their associated planets. We have performed computational simulations for a large range of stellar masses to provide predictions for important stellar characteristics (i.e., brightness, temperature, stellar winds, composition) over the stars’ lifetimes and made the data available to the public. We have also simulated the explosions of massive stars to predict the chemical abundances of material ejected from the dying stars and how that material is distributed in the surrounding universe. As a complement, we are modeling how the habitable zones and planets of stars with different abundances evolve.
ROADMAP OBJECTIVES: None Selected -
Habitability of Water-Rich Environments, Task 2: Model the Dynamics of Icy Mantles
One of Jupiter’s moons, Europa, is one of the few places in the solar system in which the physical and chemical conditions may be suitable for sustaining life. Europa is composed on an outer H2O layer, comprised of rigid ice overlying a liquid water ocean. It is this liquid water ocean which has been hypothesized as having the ingredients necessary for life, but it is shielded from our observation by the thick ice layer. However, under certain conditions, the ice layer is expected to undergo convection, possibly transporting chemicals from the liquid ocean to the surface, where we may be able to detect them. We perform computer modeling of ice/ocean convection to investigate how ocean material is carried up through the ice layer and whether it is expected to reach Europa’s surface. This work provides guidance for future missions which may probe the chemistry of the ice surface.
ROADMAP OBJECTIVES: 1.1 2.2 -
Stoichiometry of Life – Task 1 – Laboratory Studies in Biological Stoichiometry
This project component involves a set of studies of microorganisms with which we are trying to better understand how living things use chemical elements (nitrogen, phosphorus, iron, etc.) and how they cope, in a physiological sense, with shortages of such elements. For example, how does the “elemental recipe of life” change when an organism is starved for phosphorus or nitrogen or iron? Is this change similar for different species of microorganisms? Are the changes the same if the organism is limited by a different key nutrient? Furthermore, how does an organism shift its patterns of gene expression when it is starved by various nutrients? This will help in interpreting studies of gene expression in natural environments.
ROADMAP OBJECTIVES: 5.2 5.3 6.1 6.2 -
Stoichiometry of Life – Task 2c – Field Studies – Other
We performed biogeochemical and microbiological studies of novel aquatic habitats, floating pumice in lakes of northern Patagonia that were derived from the 2011 eruption of the Puyehue / Cordon Caulle volcano in Chile.
ROADMAP OBJECTIVES: 4.1 5.2 5.3 6.1 -
Task 3b: Ancient Records – Genomic
Task 3b team members are involved in deciphering genomic records of modern organisms as a way to understand how life on Earth evolved. At its core, this couples the integrated measurement and modeling of evolutionary mechanisms that drove the differences between extant genomes (and metagenomes), with experimental data on how environmental dynamics might have shaped these differences across geological timescales. This goal draws from team members’ expertise encompassing theoretical and computational biology, microbial evolution, and studying life in both extreme and dynamic environments across the planet.
ROADMAP OBJECTIVES: 5.1 5.2 5.3
Publications
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Aguirre-von-Wobeser, E., Eguiarte, L. E., Souza, V., & Soberón-Chávez, G. (2015). Theoretical analysis of the cost of antagonistic activity for aquatic bacteria in oligotrophic environments. Frontiers in Microbiology, 6. doi:10.3389/fmicb.2015.00490
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Aguirre-von-Wobeser, E., Soberón-Chávez, G., Eguiarte, L. E., Ponce-Soto, G. Y., Vázquez-Rosas-Landa, M., & Souza, V. (2013). Two-role model of an interaction network of free-living γ-proteobacteria from an oligotrophic environment. Environmental Microbiology, 16(5), 1366–1377. doi:10.1111/1462-2920.12305
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Allu Peddinti, D., & McNamara, A. K. (2015). Material transport across Europa’s ice shell. Geophysical Research Letters, 42(11), 4288–4293. doi:10.1002/2015gl063950
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Alsop, E. B., Boyd, E. S., & Raymond, J. (2014). Merging metagenomics and geochemistry reveals environmental controls on biological diversity and evolution. BMC Ecology, 14(1), 16. doi:10.1186/1472-6785-14-16
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Bailey, A. C., Kellom, M., Poret-Peterson, A. T., Noonan, K., Hartnett, H. E., & Raymond, J. (2014). Draft Genome Sequence of Bacillus sp. Strain BSC154, Isolated from Biological Soil Crust of Moab, Utah. Genome Announcements, 2(6), e01198–14–e01198–14. doi:10.1128/genomea.01198-14
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Bailey, A. C., Kellom, M., Poret-Peterson, A. T., Noonan, K., Hartnett, H. E., & Raymond, J. (2014). Draft Genome Sequence of Massilia sp. Strain BSC265, Isolated from Biological Soil Crust of Moab, Utah. Genome Announcements, 2(6), e01199–14–e01199–14. doi:10.1128/genomea.01199-14
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Bailey, A. C., Kellom, M., Poret-Peterson, A. T., Noonan, K., Hartnett, H. E., & Raymond, J. (2014). Draft Genome Sequence of Microvirga sp. Strain BSC39, Isolated from Biological Soil Crust of Moab, Utah. Genome Announcements, 2(6), e01197–14–e01197–14. doi:10.1128/genomea.01197-14
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Beraldi-Campesi, H., Farmer, J. D., & Garcia-Pichel, F. (2014). MODERN TERRESTRIAL SEDIMENTARY BIOSTRUCTURES AND THEIR FOSSIL ANALOGS IN MESOPROTEROZOIC SUBAERIAL DEPOSITS. PALAIOS, 29(2), 45–54. doi:10.2110/palo.2013.084
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Bish, D., Blake, D., Vaniman, D., Sarrazin, P., Bristow, T., Achilles, C., … Yen, A. (2014). The first X-ray diffraction measurements on Mars. IUCrJ, 1(6), 514–522. doi:10.1107/s2052252514021150
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Boyd, E. S., Thomas, K. M., Dai, Y., Boyd, J. M., & Wayne Outten, F. (2014). Interplay between Oxygen and Fe–S Cluster Biogenesis: Insights from the Suf Pathway. Biochemistry, 53(37), 5834–5847. doi:10.1021/bi500488r
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Cabrol, N. A., Herkenhoff, K., Knoll, A. H., Farmer, J., Arvidson, R., Grin, E., … Aileen Yingst, R. (2014). Sands at Gusev Crater, Mars. Journal of Geophysical Research: Planets, 119(5), 941–967. doi:10.1002/2013je004535
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Clifford, S. M., Farmer, J., Carr, M. H., Des Marais, D., Bibring, J-P., Craddock, R., & Newsom, H. (2014). Introduction to the Early Mars III Special Section and Key Questions from the Third International Conference on Early Mars. Journal of Geophysical Research: Planets, 119(8), 1892–1894. doi:10.1002/2014je004643
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Deng, W., Monks, L., & Neuer, S. (2015). Effects of clay minerals on the aggregation and subsequent settling of marine Synechococcus. Limnology and Oceanography, 60(3), 805–816. doi:10.1002/lno.10059
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Dick, J. M., & Shock, E. L. (2013). A Metastable Equilibrium Model for the Relative Abundances of Microbial Phyla in a Hot Spring. PLoS ONE, 8(9), e72395. doi:10.1371/journal.pone.0072395
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Elser, J. J., Bastidas Navarro, M., Corman, J. R., Emick, H., Kellom, M., Laspoumaderes, C., … Modenutti, B. (2014). Community Structure and Biogeochemical Impacts of Microbial Life on Floating Pumice. Appl. Environ. Microbiol., 81(5), 1542–1549. doi:10.1128/aem.03160-14
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Farmer, J. D. (2013). Role of geobiology in the astrobiological exploration of the Solar System. Geological Society of America Special Papers, None, 567–589. doi:10.1130/2013.2500(18)
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Grotzinger, J. P., Sumner, D. Y., Kah, L. C., Stack, K., Gupta, S., Edgar, L., … Moores, J. E. (2013). A Habitable Fluvio-Lacustrine Environment at Yellowknife Bay, Gale Crater, Mars. Science, 343(6169), 1242777–1242777. doi:10.1126/science.1242777
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Hardisty, D. S., Lu, Z., Planavsky, N. J., Bekker, A., Philippot, P., Zhou, X., & Lyons, T. W. (2014). An iodine record of Paleoproterozoic surface ocean oxygenation. Geology, 42(7), 619–622. doi:10.1130/g35439.1
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Hinkel, N. R., Timmes, F. X., Young, P. A., Pagano, M. D., & Turnbull, M. C. (2014). STELLAR ABUNDANCES IN THE SOLAR NEIGHBORHOOD: THE HYPATIA CATALOG. The Astronomical Journal, 148(3), 54. doi:10.1088/0004-6256/148/3/54
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Kminek, G., Conley, C., Allen, C. C., Bartlett, D. H., Beaty, D. W., Benning, L. G., … Westall, F. (2014). Report of the workshop for life detection in samples from Mars. Life Sciences in Space Research, 2, 1–5. doi:10.1016/j.lssr.2014.05.001
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McKay, C. P., Anbar, A. D., Porco, C., & Tsou, P. (2014). Follow the Plume: The Habitability of Enceladus. Astrobiology, 14(4), 352–355. doi:10.1089/ast.2014.1158
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Monga, N., & Desch, S. (2014). EXTERNAL PHOTOEVAPORATION OF THE SOLAR NEBULA: JUPITER’s NOBLE GAS ENRICHMENTS. The Astrophysical Journal, 798(1), 9. doi:10.1088/0004-637x/798/1/9
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Neveu, M., Poret-Peterson, A. T., Lee, Z. M. P., Anbar, A. D., & Elser, J. J. (2014). Prokaryotic cells separated from sediments are suitable for elemental composition analysis. Limnol. Oceanogr. Methods, 12(7), 519–529. doi:10.4319/lom.2014.12.519
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Núñez, J. I., Farmer, J. D., Sellar, R. G., Swayze, G. A., & Blaney, D. L. (2014). Science Applications of a Multispectral Microscopic Imager for the Astrobiological Exploration of Mars. Astrobiology, 14(2), 132–169. doi:10.1089/ast.2013.1079
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Oiler, J., Shock, E., Hartnett, H., & Yu, H. (2013). MEMS harsh environment sensor array-enabled hot spring mapping. 2013 IEEE SENSORS. doi:10.1109/icsens.2013.6688332
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Pagano, M., Truitt, A., Young, P. A., & Shim, S-H. (2015). THE CHEMICAL COMPOSITION OF τ CETI AND POSSIBLE EFFECTS ON TERRESTRIAL PLANETS. The Astrophysical Journal, 803(2), 90. doi:10.1088/0004-637x/803/2/90
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Pajares, S., Souza, V., & Eguiarte, L. E. (2015). Multivariate and Phylogenetic Analyses Assessing the Response of Bacterial Mat Communities from an Ancient Oligotrophic Aquatic Ecosystem to Different Scenarios of Long-Term Environmental Disturbance. PLoS ONE, 10(3), e0119741. doi:10.1371/journal.pone.0119741
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Parenteau, M. N., Jahnke, L. L., Farmer, J. D., & Cady, S. L. (2014). Production and Early Preservation of Lipid Biomarkers in Iron Hot Springs. Astrobiology, 14(6), 502–521. doi:10.1089/ast.2013.1122
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Perroni, Y., García-Oliva, F., & Souza, V. (2014). Plant species identity and soil P forms in an oligotrophic grassland–desert scrub system. Journal of Arid Environments, 108, 29–37. doi:10.1016/j.jaridenv.2014.04.009
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Perroni, Y., García-Oliva, F., Tapia-Torres, Y., & Souza, V. (2014). Relationship between soil P fractions and microbial biomass in an oligotrophic grassland-desert scrub system. Ecological Research, 29(3), 463–472. doi:10.1007/s11284-014-1138-1
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Ponce-Soto, G. Y., Aguirre-von-Wobeser, E., Eguiarte, L. E., Elser, J. J., Lee, Z-P., & Souza, V. (2015). Enrichment experiment changes microbial interactions in an ultra-oligotrophic environment. Frontiers in Microbiology, 6. doi:10.3389/fmicb.2015.00246
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Schubotz, F., Hays, L. E., Meyer-Dombard, D. A. R., Gillespie, A., Shock, E. L., & Summons, R. E. (2015). Stable isotope labeling confirms mixotrophic nature of streamer biofilm communities at alkaline hot springs. Frontiers in Microbiology, 6. doi:10.3389/fmicb.2015.00042
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Sur, S., Pan, L., & Scannapieco, E. (2014). ALIGNMENT OF THE SCALAR GRADIENT IN EVOLVING MAGNETIC FIELDS. The Astrophysical Journal, 790(1), L9. doi:10.1088/2041-8205/790/1/l9
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Sur, S., Pan, L., & Scannapieco, E. (2014). MIXING IN MAGNETIZED TURBULENT MEDIA. The Astrophysical Journal, 784(2), 94. doi:10.1088/0004-637x/784/2/94
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Tapia-Torres, Y., Elser, J. J., Souza, V., & García-Oliva, F. (2015). Ecoenzymatic stoichiometry at the extremes: How microbes cope in an ultra-oligotrophic desert soil. Soil Biology and Biochemistry, 87, 34–42. doi:10.1016/j.soilbio.2015.04.007
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Truitt, A., Young, P. A., Spacek, A., Probst, L., & Dietrich, J. (2015). A CATALOG OF STELLAR EVOLUTION PROFILES AND THE EFFECTS OF VARIABLE COMPOSITION ON HABITABLE SYSTEMS. The Astrophysical Journal, 804(2), 145. doi:10.1088/0004-637x/804/2/145
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Vaniman, D. T., Bish, D. L., Ming, D. W., Bristow, T. F., Morris, R. V., Blake, D. F., … Zorzano Mier, M-P. (2013). Mineralogy of a Mudstone at Yellowknife Bay, Gale Crater, Mars. Science, 343(6169), 1243480–1243480. doi:10.1126/science.1243480
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Young, P. A., Desch, S. J., Anbar, A. D., Barnes, R., Hinkel, N. R., Kopparapu, R., … Truitt, A. (2014). Astrobiological Stoichiometry. Astrobiology, 14(7), 603–626. doi:10.1089/ast.2014.1143
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Zolotov, M. Y. (2014). Formation of brucite and cronstedtite-bearing mineral assemblages on Ceres. Icarus, 228, 13–26. doi:10.1016/j.icarus.2013.09.020
2014 Teams
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Arizona State University
Massachusetts Institute of Technology
NASA Ames Research Center
NASA Goddard Space Flight Center
NASA Jet Propulsion Laboratory - Icy Worlds
NASA Jet Propulsion Laboratory - Titan
Pennsylvania State University
Rensselaer Polytechnic Institute
University of Hawaii, Manoa
University of Illinois at Urbana-Champaign
University of Southern California
University of Wisconsin
VPL at University of Washington