
April 24, 2018
Research Highlight
The pH-Dependent Enzyme Kinetics of Ribozymes
Researchers simulated experimental rate–pH profiles in terms of species plots in which reverse protonated charged nucleobases interact.Image credit: Frankel et al. (2017) Biochemistry 57, 5, 483-488. DOI: 10.1021/acs.biochem.7b00784.
A recent study has revealed new details about of pH-dependent enzyme kinetics in living cells. The study focuses on RNA enzymes (or ribozymes). Ribozymes contain positively (cationic) and negatively (anionic) charged bases that play a role in catalyzing biological reactions. The study expands on previous efforts that simulated rate-pH profiles for ribozymes in order to better understand how ribozymes respond to pH.
The paper, “Complexity in pH-Dependent Ribozyme Kinetics: Dark pKa Shifts and Wavy Rate–pH Profiles,” was published in the journal Biochemistry. The work was supported by NASA Astrobiology through the Exobiology & Evolutionary Biology Program.