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2010 Annual Science Report

Pennsylvania State University Reporting  |  SEP 2009 – AUG 2010

Executive Summary

The Penn State Astrobiology Research Center (PSARC) is pursuing a comprehensive and interdisciplinary investigation of biosignatures at all scales, from individual cells to the composition of planetary atmospheres. Our projects are aimed at developing novel approaches to detecting and characterizing life, investigating biosignatures in mission-relevant microbial ecosystems and ancient rocks, and evaluating the potential for biosignatures in extraterrestrial settings. This past year saw exciting progress on many of our research directions, as well as the creation of new collaborations. For example, we established a formal collaborative program between PSARC and the Centro de Astrobiologia in Spain. The goal of the research collaboration is to increase our understanding of the origins, evolution, and distribution of life on Earth and other planets of the Solar system. Our education and public outreach efforts included the continuation of undergraduate and graduate programs for students in Astrobiology, education workshops for science teachers, a large public “Exploration Day” event, and the hosting of the “Beyond the Edge of the Sea” museum exhibit.

Of principle importance, this past year, our four teams made fundamental progress in our understanding of Astrobiology through the research encompassed by our major biosignature themes.

Developing New Biosignatures

The development and experimental testing of potential indicators of life is essential for providing a critical scientific basis for the exploration of life in the cosmos. In microbial cultures, potential new biosignatures can be found among isotopic ratios, elemental compositions, and chemical changes to the growth media. Additionally, life can be detected and investigated in natural systems by directing cutting-edge instrumentation towards the investigation of microbial cells, microbial fossils, and microbial geochemical products. Our efforts are focused on creating innovative approaches for the analyses of cells and other organic material, finding ways in which metal abundances and isotope systems reflect life, and developing creative approaches for using environmental DNA to study present and past life.

During this last year, the Schopf laboratory made great progress in applying Raman imaging to a diversity of different fossils in a variety of matrices. During this reporting period, Raman imaging was applied to the investigation of microbial fossils preserved in gypsum, possible fungi in Cambrian paleosols, apatite-biomineralized protists, and organic microfossils permineralized in chert.

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We also made significant progress in our investigations of chemical, elemental, and isotopic signatures of life. This work includes investigations of bedrock weathering in the laboratory and in the field. The work suggests that Fe, Al, P, Cu, Y, and the rare earth elements can be thought of as candidate organomarkers that document the effects of organic molecules in weathered rocks. The Freeman laboratory has been investigating isotopic patterns in lipids from vascular plants (13C/12C) and in pigments, including scytonomin, in cyanobacteria (15N/14N and 13C/12C). In contrast to previous reports in the literature (Chikarishi et al., 2004; Monson and Hayes, 1980; DeNiro and Epstein, 1977), and especially in literature for microbial life (reviewed by Hayes, 2002), they consistently find that both MEP and MVA-derived terpenoid compounds in the leaves of higher plants (C3, trees) exhibit minimal fractionation relative to biomass (~ ±1 permil). Also, PSARC research has resulted in the first observation of scytonemin (a marker for cyanobacteria) in ancient sediments.

Our diverse research relating to the development of new biosignatures resulted in twenty-nine published papers during the reporting period.

Biosignatures in relevant microbial ecosystems

PSARC is investigating microbial life in some of Earth’s most mission-relevant ecosystems. These environments include the Dead Sea, the Chesapeake Bay impact structure, Eel River Basin methane seeps, Greenland glacier ice, and sulfidic cave systems. PSARC is targeting environments that, when studied, provide fundamental information that can serve as the basis for future solar system exploration. Combining our expertise in molecular biology, geochemistry, microbiology, and metagenomics, we are deciphering the microbiology, fossilization processes, and recoverable biosignatures from these mission-relevant environments.

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Much of the PSARC research that is proceeding on these relevant ecosystems, is targeting low biomass environments. Working with such samples is quite challenging. Presently, graduate student Kristine Korzow-Richter has established new DNA extraction, purification, and contamination control protocols targeting the low biomass and high concentration of interfering chemicals present in the Chesapeake Bay impact structure core. She is now poised to generate metagenomic data that will shed light on the persistence of biosignatures for transient hydrothermal ecosystems in impact basins. The Brenchley laboratory and colleagues continue to develop new cultivation strategies that allow laboratory studies of microorganisms preserved deep within the Greenland ice sheet. Their research shows that microbial cells are abundant not only in the mineral-rich ice at the base of the ice sheet, but also in “dusty” layers deposited throughout the ice sheet.

Our research investigating life in the Dead Sea resulted in a published paper on a remarkable relationship between predicted amino acid content of proteins (acidic to basic amino acids) and salinity at an environmental scale. Presently, the DNA-based research is being combined with lipid biogeochemistry to understand the roles of archaeal membrane adaptations and shifts in community composition in biomarker records of hypersaline environments.

Team members at Caltech working on marine methane seeps provided evidence this year that AOM-induced carbonates form close to the seabed and record the sediment associated microbial diversity, rather than specific methane-oxidizing lineages exclusively. They also demonstrated the frequent occurrence of a silica-rich mineral phase associated with the exterior of methanotrophic aggregates, and investigated the origins of fossil-like, abiotic structures in Quaternary methane seep carbonates. These results are important because the ability to differentiate between cellular remains and acellular mineral matter is critical for life detection efforts on other planets, as well as for tracking the evolution of biogeochemical cycles on Earth.

Biosignatures in ancient rocks

This team of geologists, geochemists, paleontologists and biologists seeks signs of early life in ancient rocks from Earth. Working mostly on that part of Earth history before the advent of skeletons and other preservable hard parts in organisms, our group focuses on geochemical traces of life and their activities. We also investigate how life has influenced, and has been influenced by changes in the surface environment, including the establishment of an oxygen-rich environment and the initiation of extreme climate states including global glaciations. For this we use a combination of observations from modern analogous environments, studies of ancient rocks, and numerical modeling.

Our work for the reporting period includes new progress on understanding the report of sulfur mass-independent fractionation (MIF). This work requires photochemical modeling, model simulation, and high-resolution measurement of SO2 isotopologue cross sections. Also, our hydrothermal experiments showing anomalous sulfur isotopic fractionation has proceeded with Watanabe et al., (2009) publishing fractionations during thermochemical sulfate reduction.

The Hedges group continued its research on the refinement of the timescale of life, with emphasis on relating the origin of different groups of organisms to chemical and geological biomarkers.

During the reporting period, there was also significant progress in research directly on ancient rocks. This included collecting samples in China from the Mesoproterozoic deep ocean, further research on the trace element geochemistry of Archean submarine basalts, investigations of the marine ecosystem during the deposition of the Pibara sediments, work on ancient black shales, and characterization of 3.4 Ga lateritic paeosols from the North Pole Dome.

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Biosignatures in extraterrestrial settings

This team investigates the abundance of sulfur gases and elucidates how these gases can be expected to evolve with time on young terrestrial planets. They are continuing studies of planet formation in the presence of migration and model radial transport of volatiles in young planetary systems, and are involved with searches for M star planetary companions and planets around K-giant stars.

During the reporting period, Kasting’s group has shown in a new published paper that SO2 is not sufficient for warm early Mars. Jim Lyons has continued work on CO photolysis and how it related to oxygen isotope anomalies in the early solar system. Finally, Sigurdsson and colleagues have moved the Pathfinder near infrared spectrograph through calibration and into its first science operations with an integrated laser comb.

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